Last updated: 2020-10-28
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Knit directory: 20190717_Lardelli_RNASeq_Larvae/
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | 6817b19 | yangdongau | 2020-10-28 | build workflow |
| Rmd | 417413a | yangdongau | 2020-10-28 | Add in WGCNA and variance partitioning analysis |
| html | e720795 | yangdongau | 2020-03-26 | changes to visualize table |
| Rmd | 443bb03 | yangdongau | 2020-03-26 | Fix index |
| html | 443bb03 | yangdongau | 2020-03-26 | Fix index |
| Rmd | 5099c07 | yangdongau | 2020-03-26 | Index DE gene comparison and validating qPCR plot |
| html | 5099c07 | yangdongau | 2020-03-26 | Index DE gene comparison and validating qPCR plot |
| Rmd | 6d48a07 | yangdongau | 2020-03-26 | Index DE gene comparison analysis |
| html | 7d1a0d3 | yangdongau | 2020-03-04 | test |
| Rmd | fa3b603 | yangdongau | 2020-03-04 | 1.Reorganize the files |
| html | fa3b603 | yangdongau | 2020-03-04 | 1.Reorganize the files |
| html | 7e50b3b | yangdongau | 2020-02-28 | fix |
| html | 8398869 | yangdongau | 2020-02-28 | Merge branch ‘master’ of github.com:yangdongau/20190717_Lardelli_RNASeq_Larvae |
| html | a19b0d3 | yangdongau | 2020-02-28 | Change texts |
| html | 3c8b6e1 | yangdongau | 2020-02-28 | Add in annotations. |
| html | 8f91594 | yangdongau | 2020-02-28 | Add in annotations. |
| html | 4e8adcc | yangdongau | 2020-02-28 | change wrong work |
| html | 91568d2 | yangdongau | 2020-02-28 | Set KEGG diagram directory clean up the folder |
| html | 0ce8f79 | yangdongau | 2020-02-27 | clean up library packages |
| Rmd | 3b63601 | yangdongau | 2020-02-27 | index 3_GSEA.rmd |
| html | 3b63601 | yangdongau | 2020-02-27 | index 3_GSEA.rmd |
| Rmd | 6c61705 | yangdongau | 2020-02-27 | Compiled DE Gene analysis |
| html | 6c61705 | yangdongau | 2020-02-27 | Compiled DE Gene analysis |
| Rmd | 84b88d5 | yangdongau | 2020-02-27 | Initialised workflowr |
| html | 84b88d5 | yangdongau | 2020-02-27 | Initialised workflowr |
| Rmd | 838c160 | yangdongau | 2020-02-27 | Start workflowr project. |
knitr::opts_chunk$set(
autodep = FALSE,
echo = TRUE,
warning = FALSE,
message = FALSE
)library(tidyverse)This website contains the analysis of RNAseq data from an experiment comparing 7 dpf zebrafish larvae from two genotypes. One genotype represented wild-type larvae, whilst the other genotype was a heterozygous mutation for the gene psen1, in which 6 nucleotides were deleted, to remove the two amino acids Q96 and K97. This mutation is generally referred to as psen1Q96K97.
Results from all steps can be found at:
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setting value
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ui X11
language (EN)
collate en_AU.UTF-8
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tz Australia/Adelaide
date 2020-10-28
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